Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912144.1_cds_XP_016462181.1_55434
CDS Infomation

[gene=LOC107785394] [db_xref=GeneID:107785394] [protein=long chain acyl-CoA synthetase 8-like isoform X2] [protein_id=XP_016462181.1] [location=complement(join(1696..1902,2214..2420,2827..2961,3049..3171,3643..3760,3906..4135,4222..4395,4489..4620,5469..5741,5830..5910,6018..6518))] [gbkey=CDS]
Sequence

ATGGCCAGCAATAGTTATGTCTCCTTATTCAATGACCAGGGGTCATCTGCGGTTGCTGGG
GCTGTTGTTATTGCGATTATAATACCTATATTCCTCTCATTGGTACTTATGGGGAAGAAA
AAGGCAAAACAGAGAGGAGTTCCAGTTCAAGTTGGTGGTGAGGCAGGTTTCGCAATGCGA
AATGCTAAATCGGACAAATTAGTTGAAGTTCCTTGGGAAGGGGCTACAACGATGGCAGCT
CTATTTGAGAAGTCTTGTAAAAAACATTCGTCTAAGCGCTGTCTTGGGACTAGAAAACTA
GTTAATAGGGACTTTATAACAGCAAAGGATGGAAGGAAGTTTGAGAAACTTCACTTGGGA
GAGTATCAGTGGGAGACTTATGGGCAAACATTTGATCGTGTTTGCAACTTTGCCTCCGGA
CTTGTTAATTTGGGTCACGATGTGGAGACTCGTGCTGCTATCTTCTCTGAAACTCGTGCG
GAGTGGCTAATTGCCTTTCAGGGATGCTTCCGCCAGAATATCACTGTTGTTACTATTTAT
GCTTCTTTGGGAGATGATGCCCTAATACACTCGTTAAATGAGACTCAAGCATCCATGTTG
ATTTGTGATGCCAAGCAACTTAAAAAATTGGCTGCAATTGGTTCTAGCTTGAAAACCATC
AAGAATGTCATATATTTTGAAGACAATGAGACTGCAATAGATTCAAGCATTTCTATGAAT
ATTGACAGCTGGAAGGTGACATCTTTCTCTGAAGTTGAAAAAGTGGGTAAAAGTAGTCCC
ATTCAGCCGATACTGCCTATAAAGAAAGATATTGCAGTGATCATGTATACAAGTGGCAGC
ACAGGAATGCCTAAGGGTGTCATGATAACTCATGGCAATATCGTAGCCACTGCAGCTGCA
GTTACAACTGTTATTCCAAAACTTGGAAGCAGTGATGTCTATTTGGCATACCTACCTTTA
GCTCATGTTTTTGAGTTAGCTGCTGAGACGGTTATGTTGACTGCTGGTGCGTCAATTGGT
TATGGGTCGGCTCTGACGTTGACAGATACATCTAATAAAATCATGAAAGGGACACAGGGA
GATGCCTCCGCTTTAAAGCCTACTTTAATGGCGGCGGTTCCAGCCATTCTGGATCGTGTT
AGGGATGGTGTTATAAAGAAGGTGGAGGAGAAGGGAGGATCTGCCAAGAAACTTTTCAAT
ATTGCCTTTAAGCGCCAATTGGACGCTATGGAAGGTAGCTGGTTTGGAGCATGGGGTCTA
GAGAAACGATTATGGGAGGTAATTGTTTTTAAAAAGATACGATCAGTACTCGGAGGAGAT
ATCCGTTTCATGCTTTGCGGTGGTGCTCCTCTGTCAAGAGATTCACAAAGATTTATCAAC
ATTTGTATGGGAGCTCCTATTGGTCAGGGATATGGCTTGACAGAGACATTTGCCGGAGCT
GCCTTTACCGAGTCAGATGATCCTTCAGTTGGTCGTGTTGGTCCACCTCTTCCTTGTTCC
TATATAAAGCTTATTTCTTGGGAAGAAGGAGGCTACAGAATTGTTGATAAGCCGATGCCT
CGGGGAGAAGTAGTTGTTGGTGGGAACAGTGTTACTGCTGGTTACTTCAACAATGATGAC
AAAACTAATGAGGTTGATGAGAGGGGCGTGCGCTGGTTCTACACAGGCGACATCGGAAGG
TTTCATCCTGATGGATGCCTTGAAATCATTGATAGAAAGAAAGATATTGTTAAACTTCAG
CACGGGGAGTATATCTCACTTGGAAAGGTTGAGGCAGCACTTTTATCAAGCAATTATGTC
GATAACATAATGGTGTATGCAGACCCCTTCCACAATTTCTGTGTAGCACTAATAGTTCCT
TCACAAAAGGTGCTTGAGAAGTGGGCACAAGAAAATGGCGTCGAGCACAGAGCTTTTTCC
GATCTATGCAACAAAGTTGAAGCGGTCAATGAGGTCCAGCAATCGCTTTCAAAGGTAGGC
AAAGCTGCAAAATTGGACAAATTTGAGATTCCTGCAAAGATCAAGTTGATACCCGAGCCA
TGGACACCCGAGTCCGGATTAGTTACTGCAGCTCTCAAATTGAAGCGCGAACCCCTTAAG
GCTAAATTCAAGGATGAGCTTCAGAAGTTGTATCATCTAGTGTTGACTGATTTATCCCCA
TGTAGCAGGAGAAATATGTAG

Peptide Sequence

PEP ID

XP_016462181.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 8-like isoform X2 [Nicotiana tabacum]
Sequence

MASNSYVSLFNDQGSSAVAGAVVIAIIIPIFLSLVLMGKKKAKQRGVPVQVGGEAGFAMR
NAKSDKLVEVPWEGATTMAALFEKSCKKHSSKRCLGTRKLVNRDFITAKDGRKFEKLHLG
EYQWETYGQTFDRVCNFASGLVNLGHDVETRAAIFSETRAEWLIAFQGCFRQNITVVTIY
ASLGDDALIHSLNETQASMLICDAKQLKKLAAIGSSLKTIKNVIYFEDNETAIDSSISMN
IDSWKVTSFSEVEKVGKSSPIQPILPIKKDIAVIMYTSGSTGMPKGVMITHGNIVATAAA
VTTVIPKLGSSDVYLAYLPLAHVFELAAETVMLTAGASIGYGSALTLTDTSNKIMKGTQG
DASALKPTLMAAVPAILDRVRDGVIKKVEEKGGSAKKLFNIAFKRQLDAMEGSWFGAWGL
EKRLWEVIVFKKIRSVLGGDIRFMLCGGAPLSRDSQRFINICMGAPIGQGYGLTETFAGA
AFTESDDPSVGRVGPPLPCSYIKLISWEEGGYRIVDKPMPRGEVVVGGNSVTAGYFNNDD
KTNEVDERGVRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALLSSNYV
DNIMVYADPFHNFCVALIVPSQKVLEKWAQENGVEHRAFSDLCNKVEAVNEVQQSLSKVG
KAAKLDKFEIPAKIKLIPEPWTPESGLVTAALKLKREPLKAKFKDELQKLYHLVLTDLSP
CSRRNM

Transcript Sequence

Gene sequence data has not been registered.